derivative profiling omics package (dpop) Search Results


derivative profiling omics package (dpop)  (MathWorks Inc)
90
MathWorks Inc derivative profiling omics package (dpop)
Flowchart of <t>derivative</t> profiling workflow. Data is input in the first block labeled <t>“organized-omics</t> data”. Any arrow is a tunable process operation of the overall workflow. Lists can be output and analyzed independently without bioinformatic analysis
Derivative Profiling Omics Package (Dpop), supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/derivative profiling omics package (dpop)/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
derivative profiling omics package (dpop) - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
dpop  (MathWorks Inc)
90
MathWorks Inc dpop
Flowchart of <t>derivative</t> profiling workflow. Data is input in the first block labeled <t>“organized-omics</t> data”. Any arrow is a tunable process operation of the overall workflow. Lists can be output and analyzed independently without bioinformatic analysis
Dpop, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/dpop/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
dpop - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
app based gui dpop  (MathWorks Inc)
90
MathWorks Inc app based gui dpop
MATLAB App Based <t>GUI</t> <t>DPoP:</t> the distribution of derivatives at a point, as well as the distribution of slopes, is represented in the GUI on the top left. The inputs/user controls are at the bottom left. The list of signals with significantly positive and negative derivatives is in the column in the middle. The column section on the right displays the results of the GO term enrichment analysis applied to the list of significant signals, with respect to the population of signals. Controls are included in the GUI to select the statistical significance, the normalization factor, the GO database file, GO database field identifier, the first and final timepoint of interest in the regression, the first and final time point of interest within the regression, and the threshold for filtering based on noise or number of consecutive non-zero signals
App Based Gui Dpop, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/app based gui dpop/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
app based gui dpop - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
os(ii)(dpop)  (Knobbe Martens)
90
Knobbe Martens os(ii)(dpop)
MATLAB App Based <t>GUI</t> <t>DPoP:</t> the distribution of derivatives at a point, as well as the distribution of slopes, is represented in the GUI on the top left. The inputs/user controls are at the bottom left. The list of signals with significantly positive and negative derivatives is in the column in the middle. The column section on the right displays the results of the GO term enrichment analysis applied to the list of significant signals, with respect to the population of signals. Controls are included in the GUI to select the statistical significance, the normalization factor, the GO database file, GO database field identifier, the first and final timepoint of interest in the regression, the first and final time point of interest within the regression, and the threshold for filtering based on noise or number of consecutive non-zero signals
Os(Ii)(Dpop), supplied by Knobbe Martens, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/os(ii)(dpop)/product/Knobbe Martens
Average 90 stars, based on 1 article reviews
os(ii)(dpop) - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
the dpos  (Qiagen)
90
Qiagen the dpos
MATLAB App Based <t>GUI</t> <t>DPoP:</t> the distribution of derivatives at a point, as well as the distribution of slopes, is represented in the GUI on the top left. The inputs/user controls are at the bottom left. The list of signals with significantly positive and negative derivatives is in the column in the middle. The column section on the right displays the results of the GO term enrichment analysis applied to the list of significant signals, with respect to the population of signals. Controls are included in the GUI to select the statistical significance, the normalization factor, the GO database file, GO database field identifier, the first and final timepoint of interest in the regression, the first and final time point of interest within the regression, and the threshold for filtering based on noise or number of consecutive non-zero signals
The Dpos, supplied by Qiagen, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/the dpos/product/Qiagen
Average 90 stars, based on 1 article reviews
the dpos - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
dpo4  (Trevigen)
90
Trevigen dpo4
DNA synthesis and selective nucleotide incorporation opposite urea (Ua) by DNA polymerase ζ (panel A), DNA polymerase η (panel B) and Sulfolobus solfataricus P2 DNA polymerase IV <t>(Dpo4)</t> (panel C). DNA polymerase ζ (1.7 ng), DNA polymerase η (0.4 ng) and Dpo4 (0.4 ng) ware incubated with templates containing G (lanes 1–5) or Ua (lanes 6–10) and 100 μM of each of the four dNTPs (lanes 5 and 10) or 100 μM of a single dNTP (N = C, G, A, or T) (lanes 1–4 and 6–9). Lane M contained no enzyme and are negative controls
Dpo4, supplied by Trevigen, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/dpo4/product/Trevigen
Average 90 stars, based on 1 article reviews
dpo4 - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
dpor  (Marinus)
90
Marinus dpor
DNA synthesis and selective nucleotide incorporation opposite urea (Ua) by DNA polymerase ζ (panel A), DNA polymerase η (panel B) and Sulfolobus solfataricus P2 DNA polymerase IV <t>(Dpo4)</t> (panel C). DNA polymerase ζ (1.7 ng), DNA polymerase η (0.4 ng) and Dpo4 (0.4 ng) ware incubated with templates containing G (lanes 1–5) or Ua (lanes 6–10) and 100 μM of each of the four dNTPs (lanes 5 and 10) or 100 μM of a single dNTP (N = C, G, A, or T) (lanes 1–4 and 6–9). Lane M contained no enzyme and are negative controls
Dpor, supplied by Marinus, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/dpor/product/Marinus
Average 90 stars, based on 1 article reviews
dpor - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
mutant version of mi dpo4  (Noxxon Pharma)
90
Noxxon Pharma mutant version of mi dpo4
DNA synthesis and selective nucleotide incorporation opposite urea (Ua) by DNA polymerase ζ (panel A), DNA polymerase η (panel B) and Sulfolobus solfataricus P2 DNA polymerase IV <t>(Dpo4)</t> (panel C). DNA polymerase ζ (1.7 ng), DNA polymerase η (0.4 ng) and Dpo4 (0.4 ng) ware incubated with templates containing G (lanes 1–5) or Ua (lanes 6–10) and 100 μM of each of the four dNTPs (lanes 5 and 10) or 100 μM of a single dNTP (N = C, G, A, or T) (lanes 1–4 and 6–9). Lane M contained no enzyme and are negative controls
Mutant Version Of Mi Dpo4, supplied by Noxxon Pharma, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/mutant version of mi dpo4/product/Noxxon Pharma
Average 90 stars, based on 1 article reviews
mutant version of mi dpo4 - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
dpo4  (Verlag GmbH)
90
Verlag GmbH dpo4
DNA synthesis and selective nucleotide incorporation opposite urea (Ua) by DNA polymerase ζ (panel A), DNA polymerase η (panel B) and Sulfolobus solfataricus P2 DNA polymerase IV <t>(Dpo4)</t> (panel C). DNA polymerase ζ (1.7 ng), DNA polymerase η (0.4 ng) and Dpo4 (0.4 ng) ware incubated with templates containing G (lanes 1–5) or Ua (lanes 6–10) and 100 μM of each of the four dNTPs (lanes 5 and 10) or 100 μM of a single dNTP (N = C, G, A, or T) (lanes 1–4 and 6–9). Lane M contained no enzyme and are negative controls
Dpo4, supplied by Verlag GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/dpo4/product/Verlag GmbH
Average 90 stars, based on 1 article reviews
dpo4 - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
dpol_t4  (InterPro Inc)
90
InterPro Inc dpol_t4
DNA synthesis and selective nucleotide incorporation opposite urea (Ua) by DNA polymerase ζ (panel A), DNA polymerase η (panel B) and Sulfolobus solfataricus P2 DNA polymerase IV <t>(Dpo4)</t> (panel C). DNA polymerase ζ (1.7 ng), DNA polymerase η (0.4 ng) and Dpo4 (0.4 ng) ware incubated with templates containing G (lanes 1–5) or Ua (lanes 6–10) and 100 μM of each of the four dNTPs (lanes 5 and 10) or 100 μM of a single dNTP (N = C, G, A, or T) (lanes 1–4 and 6–9). Lane M contained no enzyme and are negative controls
Dpol T4, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/dpol_t4/product/InterPro Inc
Average 90 stars, based on 1 article reviews
dpol_t4 - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
dpo4 polymerase  (Millipore)
90
Millipore dpo4 polymerase
DNA synthesis and selective nucleotide incorporation opposite urea (Ua) by DNA polymerase ζ (panel A), DNA polymerase η (panel B) and Sulfolobus solfataricus P2 DNA polymerase IV <t>(Dpo4)</t> (panel C). DNA polymerase ζ (1.7 ng), DNA polymerase η (0.4 ng) and Dpo4 (0.4 ng) ware incubated with templates containing G (lanes 1–5) or Ua (lanes 6–10) and 100 μM of each of the four dNTPs (lanes 5 and 10) or 100 μM of a single dNTP (N = C, G, A, or T) (lanes 1–4 and 6–9). Lane M contained no enzyme and are negative controls
Dpo4 Polymerase, supplied by Millipore, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/dpo4 polymerase/product/Millipore
Average 90 stars, based on 1 article reviews
dpo4 polymerase - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier
dpof file  (Unicode Inc)
90
Unicode Inc dpof file
DNA synthesis and selective nucleotide incorporation opposite urea (Ua) by DNA polymerase ζ (panel A), DNA polymerase η (panel B) and Sulfolobus solfataricus P2 DNA polymerase IV <t>(Dpo4)</t> (panel C). DNA polymerase ζ (1.7 ng), DNA polymerase η (0.4 ng) and Dpo4 (0.4 ng) ware incubated with templates containing G (lanes 1–5) or Ua (lanes 6–10) and 100 μM of each of the four dNTPs (lanes 5 and 10) or 100 μM of a single dNTP (N = C, G, A, or T) (lanes 1–4 and 6–9). Lane M contained no enzyme and are negative controls
Dpof File, supplied by Unicode Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/dpof file/product/Unicode Inc
Average 90 stars, based on 1 article reviews
dpof file - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier

Image Search Results


Flowchart of derivative profiling workflow. Data is input in the first block labeled “organized-omics data”. Any arrow is a tunable process operation of the overall workflow. Lists can be output and analyzed independently without bioinformatic analysis

Journal: BMC Bioinformatics

Article Title: Using flux theory in dynamic omics data sets to identify differentially changing signals using DPoP

doi: 10.1186/s12859-024-05938-9

Figure Lengend Snippet: Flowchart of derivative profiling workflow. Data is input in the first block labeled “organized-omics data”. Any arrow is a tunable process operation of the overall workflow. Lists can be output and analyzed independently without bioinformatic analysis

Article Snippet: This method has been packaged in an open-source, GUI-based MATLAB app, the Derivative Profiling omics Package (DPoP).

Techniques: Blocking Assay, Labeling

MATLAB App Based GUI DPoP: the distribution of derivatives at a point, as well as the distribution of slopes, is represented in the GUI on the top left. The inputs/user controls are at the bottom left. The list of signals with significantly positive and negative derivatives is in the column in the middle. The column section on the right displays the results of the GO term enrichment analysis applied to the list of significant signals, with respect to the population of signals. Controls are included in the GUI to select the statistical significance, the normalization factor, the GO database file, GO database field identifier, the first and final timepoint of interest in the regression, the first and final time point of interest within the regression, and the threshold for filtering based on noise or number of consecutive non-zero signals

Journal: BMC Bioinformatics

Article Title: Using flux theory in dynamic omics data sets to identify differentially changing signals using DPoP

doi: 10.1186/s12859-024-05938-9

Figure Lengend Snippet: MATLAB App Based GUI DPoP: the distribution of derivatives at a point, as well as the distribution of slopes, is represented in the GUI on the top left. The inputs/user controls are at the bottom left. The list of signals with significantly positive and negative derivatives is in the column in the middle. The column section on the right displays the results of the GO term enrichment analysis applied to the list of significant signals, with respect to the population of signals. Controls are included in the GUI to select the statistical significance, the normalization factor, the GO database file, GO database field identifier, the first and final timepoint of interest in the regression, the first and final time point of interest within the regression, and the threshold for filtering based on noise or number of consecutive non-zero signals

Article Snippet: Fig. 7 MATLAB App Based GUI DPoP: the distribution of derivatives at a point, as well as the distribution of slopes, is represented in the GUI on the top left.

Techniques:

DNA synthesis and selective nucleotide incorporation opposite urea (Ua) by DNA polymerase ζ (panel A), DNA polymerase η (panel B) and Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4) (panel C). DNA polymerase ζ (1.7 ng), DNA polymerase η (0.4 ng) and Dpo4 (0.4 ng) ware incubated with templates containing G (lanes 1–5) or Ua (lanes 6–10) and 100 μM of each of the four dNTPs (lanes 5 and 10) or 100 μM of a single dNTP (N = C, G, A, or T) (lanes 1–4 and 6–9). Lane M contained no enzyme and are negative controls

Journal: Genes and Environment

Article Title: Analysis of nucleotide insertion opposite urea and translesion synthesis across urea by DNA polymerases

doi: 10.1186/s41021-022-00236-3

Figure Lengend Snippet: DNA synthesis and selective nucleotide incorporation opposite urea (Ua) by DNA polymerase ζ (panel A), DNA polymerase η (panel B) and Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4) (panel C). DNA polymerase ζ (1.7 ng), DNA polymerase η (0.4 ng) and Dpo4 (0.4 ng) ware incubated with templates containing G (lanes 1–5) or Ua (lanes 6–10) and 100 μM of each of the four dNTPs (lanes 5 and 10) or 100 μM of a single dNTP (N = C, G, A, or T) (lanes 1–4 and 6–9). Lane M contained no enzyme and are negative controls

Article Snippet: Dpo4 was purchased from Trevigen (Gaithersburg, USA).

Techniques: DNA Synthesis, Incubation